Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a1Q00780 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a1Q00780 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a1Q00780 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a1Q00780 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a1Q00780 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.43□□□□□ -0.26
Col8a1Q00780 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a1Q00780 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Col8a1Q00780 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a1Q00780 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a1Q00780 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col8a1Q00780 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Col8a1Q00780 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col8a1Q00780 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col8a1Q00780 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.42□□□□□ -0.26
Col8a1Q00780 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col8a1Q00780 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.42□□□□□ -0.26
Col8a1Q00780 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.42□□□□□ -0.26
Col8a1Q00780 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.42□□□□□ -0.26
Col8a1Q00780 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.42□□□□□ -0.26
Col8a1Q00780 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.42□□□□□ -0.26
Col8a1Q00780 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col8a1Q00780 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col8a1Q00780 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.41□□□□□ -0.26
Col8a1Q00780 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col8a1Q00780 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.41□□□□□ -0.26
Col8a1Q00780 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.41□□□□□ -0.26
Col8a1Q00780 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.41□□□□□ -0.26
Col8a1Q00780 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
Col8a1Q00780 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Gm25948-201ENSMUST00000175334 112 ntBASIC13.41□□□□□ -0.26
Col8a1Q00780 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.41□□□□□ -0.26
Col8a1Q00780 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.41□□□□□ -0.26
Col8a1Q00780 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.41□□□□□ -0.26
Col8a1Q00780 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col8a1Q00780 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col8a1Q00780 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Col8a1Q00780 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a1Q00780 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.4□□□□□ -0.26
Col8a1Q00780 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.4□□□□□ -0.26
Col8a1Q00780 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a1Q00780 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a1Q00780 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Col8a1Q00780 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a1Q00780 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a1Q00780 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a1Q00780 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a1Q00780 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a1Q00780 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a1Q00780 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Col8a1Q00780 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a1Q00780 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col8a1Q00780 Gm8825-201ENSMUST00000182565 998 ntBASIC13.4□□□□□ -0.26
Col8a1Q00780 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a1Q00780 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col8a1Q00780 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms