Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Shc1P98083 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.19□□□□□ -0.14
Shc1P98083 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Shc1P98083 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Shc1P98083 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.19□□□□□ -0.14
Shc1P98083 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Shc1P98083 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.19□□□□□ -0.14
Shc1P98083 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Shc1P98083 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shc1P98083 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Shc1P98083 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Gm4459-201ENSMUST00000118750 468 ntBASIC14.18□□□□□ -0.14
Shc1P98083 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Shc1P98083 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.18□□□□□ -0.14
Shc1P98083 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.18□□□□□ -0.14
Shc1P98083 Gm27741-201ENSMUST00000185060 237 ntBASIC14.18□□□□□ -0.14
Shc1P98083 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.18□□□□□ -0.14
Shc1P98083 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Shc1P98083 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shc1P98083 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Shc1P98083 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.17□□□□□ -0.14
Shc1P98083 Gm44357-201ENSMUST00000195897 142 ntBASIC14.17□□□□□ -0.14
Shc1P98083 Gm19658-201ENSMUST00000196231 138 ntBASIC14.17□□□□□ -0.14
Shc1P98083 Gm44367-201ENSMUST00000196836 138 ntBASIC14.17□□□□□ -0.14
Shc1P98083 Gm44350-201ENSMUST00000197197 138 ntBASIC14.17□□□□□ -0.14
Shc1P98083 Gm44390-201ENSMUST00000197533 144 ntBASIC14.17□□□□□ -0.14
Shc1P98083 Gm44313-201ENSMUST00000198018 138 ntBASIC14.17□□□□□ -0.14
Shc1P98083 Gm44486-201ENSMUST00000198508 138 ntBASIC14.17□□□□□ -0.14
Shc1P98083 Gm44314-201ENSMUST00000199263 138 ntBASIC14.17□□□□□ -0.14
Shc1P98083 Gm44394-201ENSMUST00000199558 138 ntBASIC14.17□□□□□ -0.14
Shc1P98083 Gm44484-201ENSMUST00000199873 138 ntBASIC14.17□□□□□ -0.14
Shc1P98083 Gm44466-201ENSMUST00000200264 138 ntBASIC14.17□□□□□ -0.14
Shc1P98083 Gm44359-201ENSMUST00000200671 138 ntBASIC14.17□□□□□ -0.14
Shc1P98083 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.17□□□□□ -0.14
Shc1P98083 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Shc1P98083 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Shc1P98083 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Shc1P98083 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.17□□□□□ -0.14
Shc1P98083 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shc1P98083 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms