Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx3-2P97503 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx3-2P97503 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.89□□□□□ -0.03
Nkx3-2P97503 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.89□□□□□ -0.03
Nkx3-2P97503 Gm4535-201ENSMUST00000182274 558 ntBASIC14.89□□□□□ -0.03
Nkx3-2P97503 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.89□□□□□ -0.03
Nkx3-2P97503 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Gm10355-201ENSMUST00000097146 517 ntBASIC14.89□□□□□ -0.03
Nkx3-2P97503 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx3-2P97503 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nkx3-2P97503 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.88□□□□□ -0.03
Nkx3-2P97503 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
Nkx3-2P97503 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Gm10060-201ENSMUST00000212002 111 ntBASIC14.88□□□□□ -0.03
Nkx3-2P97503 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx3-2P97503 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Gm2651-201ENSMUST00000203560 838 ntBASIC14.87□□□□□ -0.03
Nkx3-2P97503 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.87□□□□□ -0.03
Nkx3-2P97503 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx3-2P97503 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx3-2P97503 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx3-2P97503 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms