Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npas1P97459 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npas1P97459 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npas1P97459 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npas1P97459 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Npas1P97459 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npas1P97459 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npas1P97459 Gm18958-201ENSMUST00000174258 762 ntBASIC13.28□□□□□ -0.28
Npas1P97459 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npas1P97459 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npas1P97459 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Npas1P97459 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npas1P97459 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Npas1P97459 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npas1P97459 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npas1P97459 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npas1P97459 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Npas1P97459 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Npas1P97459 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npas1P97459 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Npas1P97459 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Npas1P97459 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Npas1P97459 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Npas1P97459 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Npas1P97459 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Npas1P97459 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Npas1P97459 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Npas1P97459 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Npas1P97459 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Npas1P97459 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Npas1P97459 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Npas1P97459 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Npas1P97459 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npas1P97459 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.27□□□□□ -0.29
Npas1P97459 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npas1P97459 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Npas1P97459 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.27□□□□□ -0.29
Npas1P97459 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.27□□□□□ -0.29
Npas1P97459 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Npas1P97459 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.27□□□□□ -0.29
Npas1P97459 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Npas1P97459 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npas1P97459 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npas1P97459 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Npas1P97459 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Npas1P97459 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Npas1P97459 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Npas1P97459 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Npas1P97459 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Npas1P97459 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Npas1P97459 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Npas1P97459 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Npas1P97459 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npas1P97459 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npas1P97459 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npas1P97459 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Npas1P97459 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npas1P97459 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npas1P97459 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.27□□□□□ -0.29
Npas1P97459 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Npas1P97459 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Npas1P97459 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Npas1P97459 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Npas1P97459 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Npas1P97459 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Npas1P97459 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Npas1P97459 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Npas1P97459 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.26□□□□□ -0.29
Npas1P97459 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.26□□□□□ -0.29
Npas1P97459 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Npas1P97459 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Npas1P97459 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Npas1P97459 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.25□□□□□ -0.29
Npas1P97459 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Npas1P97459 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Npas1P97459 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Npas1P97459 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Npas1P97459 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Npas1P97459 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Npas1P97459 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms