Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim43cP86449 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.15■□□□□ 0.34
Trim43cP86449 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
Trim43cP86449 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Birc2-201ENSMUST00000054878 378 ntBASIC17.15■□□□□ 0.34
Trim43cP86449 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim43cP86449 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim43cP86449 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim43cP86449 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim43cP86449 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Trim43cP86449 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim43cP86449 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.14■□□□□ 0.33
Trim43cP86449 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.14■□□□□ 0.33
Trim43cP86449 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim43cP86449 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.14■□□□□ 0.33
Trim43cP86449 Gm18622-201ENSMUST00000219361 595 ntBASIC17.14■□□□□ 0.33
Trim43cP86449 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim43cP86449 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim43cP86449 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim43cP86449 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim43cP86449 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim43cP86449 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.14■□□□□ 0.33
Trim43cP86449 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trim43cP86449 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trim43cP86449 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43cP86449 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43cP86449 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43cP86449 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trim43cP86449 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43cP86449 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43cP86449 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43cP86449 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim43cP86449 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43cP86449 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim43cP86449 Gm12644-201ENSMUST00000119935 606 ntBASIC17.13■□□□□ 0.33
Trim43cP86449 Gm12497-201ENSMUST00000138778 237 ntBASIC17.13■□□□□ 0.33
Trim43cP86449 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.13■□□□□ 0.33
Trim43cP86449 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43cP86449 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.13■□□□□ 0.33
Trim43cP86449 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43cP86449 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43cP86449 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43cP86449 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43cP86449 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trim43cP86449 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43cP86449 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim43cP86449 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim43cP86449 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.13■□□□□ 0.33
Trim43cP86449 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43cP86449 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim43cP86449 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim43cP86449 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim43cP86449 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim43cP86449 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim43cP86449 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43cP86449 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms