Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Gm8655-201ENSMUST00000221159 852 ntBASIC14.06□□□□□ -0.16
SgcbP82349 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SgcbP82349 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SgcbP82349 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SgcbP82349 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SgcbP82349 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SgcbP82349 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcbP82349 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.05□□□□□ -0.16
SgcbP82349 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcbP82349 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SgcbP82349 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcbP82349 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcbP82349 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SgcbP82349 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcbP82349 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SgcbP82349 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SgcbP82349 Gm6376-201ENSMUST00000209407 580 ntBASIC14.05□□□□□ -0.16
SgcbP82349 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.05□□□□□ -0.16
SgcbP82349 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SgcbP82349 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.05□□□□□ -0.16
SgcbP82349 Gm7461-201ENSMUST00000058918 827 ntBASIC14.05□□□□□ -0.16
SgcbP82349 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.05□□□□□ -0.16
SgcbP82349 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcbP82349 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcbP82349 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SgcbP82349 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SgcbP82349 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcbP82349 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcbP82349 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcbP82349 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SgcbP82349 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcbP82349 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcbP82349 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcbP82349 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
SgcbP82349 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcbP82349 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcbP82349 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcbP82349 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.04□□□□□ -0.16
SgcbP82349 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.04□□□□□ -0.16
SgcbP82349 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.04□□□□□ -0.16
SgcbP82349 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcbP82349 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcbP82349 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcbP82349 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcbP82349 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcbP82349 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcbP82349 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcbP82349 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SgcbP82349 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SgcbP82349 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SgcbP82349 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.03□□□□□ -0.16
SgcbP82349 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SgcbP82349 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.03□□□□□ -0.16
SgcbP82349 Rps4l-201ENSMUST00000071745 943 ntBASIC14.03□□□□□ -0.16
SgcbP82349 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcbP82349 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.03□□□□□ -0.16
SgcbP82349 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcbP82349 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcbP82349 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
SgcbP82349 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SgcbP82349 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcbP82349 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcbP82349 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SgcbP82349 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcbP82349 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcbP82349 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcbP82349 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SgcbP82349 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
SgcbP82349 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcbP82349 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.02□□□□□ -0.16
SgcbP82349 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SgcbP82349 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcbP82349 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.02□□□□□ -0.16
SgcbP82349 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SgcbP82349 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcbP82349 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SgcbP82349 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcbP82349 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcbP82349 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.02□□□□□ -0.16
SgcbP82349 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.02□□□□□ -0.16
SgcbP82349 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcbP82349 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcbP82349 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcbP82349 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcbP82349 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.02□□□□□ -0.17
SgcbP82349 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcbP82349 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcbP82349 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms