Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.84□□□□□ -0.03
Cxcr4P70658 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcr4P70658 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcr4P70658 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcr4P70658 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcr4P70658 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcr4P70658 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Cxcr4P70658 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcr4P70658 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcr4P70658 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcr4P70658 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcr4P70658 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.84□□□□□ -0.03
Cxcr4P70658 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cxcr4P70658 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cxcr4P70658 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cxcr4P70658 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cxcr4P70658 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cxcr4P70658 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.83□□□□□ -0.04
Cxcr4P70658 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcr4P70658 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcr4P70658 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.83□□□□□ -0.04
Cxcr4P70658 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcr4P70658 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcr4P70658 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcr4P70658 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.83□□□□□ -0.04
Cxcr4P70658 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcr4P70658 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cxcr4P70658 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcr4P70658 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcr4P70658 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcr4P70658 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cxcr4P70658 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cxcr4P70658 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcr4P70658 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cxcr4P70658 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcr4P70658 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cxcr4P70658 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcr4P70658 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.82□□□□□ -0.04
Cxcr4P70658 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.82□□□□□ -0.04
Cxcr4P70658 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcr4P70658 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcr4P70658 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcr4P70658 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.82□□□□□ -0.04
Cxcr4P70658 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Cxcr4P70658 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcr4P70658 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcr4P70658 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cxcr4P70658 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.82□□□□□ -0.04
Cxcr4P70658 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcr4P70658 Gm9103-201ENSMUST00000119371 405 ntBASIC14.82□□□□□ -0.04
Cxcr4P70658 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.82□□□□□ -0.04
Cxcr4P70658 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcr4P70658 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.82□□□□□ -0.04
Cxcr4P70658 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcr4P70658 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcr4P70658 Gm27742-201ENSMUST00000184667 60 ntBASIC14.82□□□□□ -0.04
Cxcr4P70658 Gm17807-201ENSMUST00000186869 298 ntBASIC14.82□□□□□ -0.04
Cxcr4P70658 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.82□□□□□ -0.04
Cxcr4P70658 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcr4P70658 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cxcr4P70658 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcr4P70658 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.82□□□□□ -0.04
Cxcr4P70658 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcr4P70658 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcr4P70658 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Cxcr4P70658 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cxcr4P70658 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Cxcr4P70658 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Cxcr4P70658 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cxcr4P70658 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Cxcr4P70658 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.81□□□□□ -0.04
Cxcr4P70658 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cxcr4P70658 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.8□□□□□ -0.04
Cxcr4P70658 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.8□□□□□ -0.04
Cxcr4P70658 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cxcr4P70658 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcr4P70658 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcr4P70658 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cxcr4P70658 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.8□□□□□ -0.04
Cxcr4P70658 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cxcr4P70658 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cxcr4P70658 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cxcr4P70658 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms