Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.04■□□□□ 0.32
PrkcbP68404 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.04■□□□□ 0.32
PrkcbP68404 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 Gm6443-201ENSMUST00000203599 874 ntBASIC17.04■□□□□ 0.32
PrkcbP68404 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PrkcbP68404 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PrkcbP68404 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PrkcbP68404 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PrkcbP68404 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PrkcbP68404 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PrkcbP68404 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PrkcbP68404 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PrkcbP68404 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PrkcbP68404 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PrkcbP68404 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PrkcbP68404 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
PrkcbP68404 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PrkcbP68404 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PrkcbP68404 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.03■□□□□ 0.32
PrkcbP68404 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PrkcbP68404 AW822252-206ENSMUST00000208904 237 ntBASIC17.03■□□□□ 0.32
PrkcbP68404 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.03■□□□□ 0.32
PrkcbP68404 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PrkcbP68404 Gm15590-201ENSMUST00000078419 552 ntBASIC17.03■□□□□ 0.32
PrkcbP68404 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
PrkcbP68404 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.03■□□□□ 0.32
PrkcbP68404 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.03■□□□□ 0.32
PrkcbP68404 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PrkcbP68404 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.03■□□□□ 0.32
PrkcbP68404 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PrkcbP68404 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PrkcbP68404 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PrkcbP68404 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PrkcbP68404 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PrkcbP68404 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PrkcbP68404 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PrkcbP68404 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PrkcbP68404 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PrkcbP68404 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PrkcbP68404 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PrkcbP68404 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PrkcbP68404 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.02■□□□□ 0.32
PrkcbP68404 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PrkcbP68404 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PrkcbP68404 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PrkcbP68404 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PrkcbP68404 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PrkcbP68404 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PrkcbP68404 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PrkcbP68404 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PrkcbP68404 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PrkcbP68404 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PrkcbP68404 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PrkcbP68404 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.02■□□□□ 0.31
PrkcbP68404 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PrkcbP68404 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.01■□□□□ 0.31
PrkcbP68404 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
PrkcbP68404 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.01■□□□□ 0.31
PrkcbP68404 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.01■□□□□ 0.31
PrkcbP68404 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PrkcbP68404 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Gm15358-201ENSMUST00000119249 520 ntBASIC17.01■□□□□ 0.31
PrkcbP68404 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.01■□□□□ 0.31
PrkcbP68404 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.01■□□□□ 0.31
PrkcbP68404 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.01■□□□□ 0.31
PrkcbP68404 Gm18206-201ENSMUST00000207027 926 ntBASIC17.01■□□□□ 0.31
PrkcbP68404 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.01■□□□□ 0.31
PrkcbP68404 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PrkcbP68404 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms