Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb1P63158 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Hmgb1P63158 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.36■□□□□ 0.37
Hmgb1P63158 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb1P63158 Gm11950-201ENSMUST00000121615 838 ntBASIC17.36■□□□□ 0.37
Hmgb1P63158 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb1P63158 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb1P63158 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.36■□□□□ 0.37
Hmgb1P63158 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hmgb1P63158 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb1P63158 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hmgb1P63158 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb1P63158 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb1P63158 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb1P63158 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb1P63158 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb1P63158 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb1P63158 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb1P63158 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb1P63158 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgb1P63158 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Hmgb1P63158 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.35■□□□□ 0.37
Hmgb1P63158 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Hmgb1P63158 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Hmgb1P63158 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.35■□□□□ 0.37
Hmgb1P63158 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hmgb1P63158 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.35■□□□□ 0.37
Hmgb1P63158 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.35■□□□□ 0.37
Hmgb1P63158 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgb1P63158 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Hmgb1P63158 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Hmgb1P63158 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.34■□□□□ 0.37
Hmgb1P63158 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.34■□□□□ 0.37
Hmgb1P63158 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.34■□□□□ 0.37
Hmgb1P63158 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgb1P63158 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.33■□□□□ 0.37
Hmgb1P63158 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmgb1P63158 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmgb1P63158 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hmgb1P63158 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hmgb1P63158 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Hmgb1P63158 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb1P63158 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb1P63158 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb1P63158 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb1P63158 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb1P63158 Gm6345-202ENSMUST00000180900 204 ntBASIC17.33■□□□□ 0.36
Hmgb1P63158 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.33■□□□□ 0.36
Hmgb1P63158 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.33■□□□□ 0.36
Hmgb1P63158 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb1P63158 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb1P63158 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb1P63158 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb1P63158 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
Hmgb1P63158 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb1P63158 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Hmgb1P63158 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb1P63158 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgb1P63158 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hmgb1P63158 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms