Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ybx1P62960 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.15■□□□□ 0.18
Ybx1P62960 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.15■□□□□ 0.18
Ybx1P62960 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.15■□□□□ 0.18
Ybx1P62960 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ybx1P62960 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ybx1P62960 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.15■□□□□ 0.18
Ybx1P62960 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ybx1P62960 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ybx1P62960 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ybx1P62960 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.15■□□□□ 0.18
Ybx1P62960 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ybx1P62960 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ybx1P62960 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ybx1P62960 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ybx1P62960 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ybx1P62960 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ybx1P62960 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.15■□□□□ 0.18
Ybx1P62960 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ybx1P62960 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ybx1P62960 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ybx1P62960 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ybx1P62960 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ybx1P62960 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Ybx1P62960 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.14■□□□□ 0.17
Ybx1P62960 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ybx1P62960 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.14■□□□□ 0.17
Ybx1P62960 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ybx1P62960 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ybx1P62960 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ybx1P62960 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ybx1P62960 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.14■□□□□ 0.17
Ybx1P62960 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ybx1P62960 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Ybx1P62960 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ybx1P62960 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ybx1P62960 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ybx1P62960 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ybx1P62960 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ybx1P62960 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Ybx1P62960 Gm8344-201ENSMUST00000119813 856 ntBASIC16.13■□□□□ 0.17
Ybx1P62960 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.13■□□□□ 0.17
Ybx1P62960 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ybx1P62960 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ybx1P62960 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ybx1P62960 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ybx1P62960 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ybx1P62960 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.12■□□□□ 0.17
Ybx1P62960 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ybx1P62960 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ybx1P62960 Gm15358-201ENSMUST00000119249 520 ntBASIC16.12■□□□□ 0.17
Ybx1P62960 Gm13597-201ENSMUST00000121239 375 ntBASIC16.12■□□□□ 0.17
Ybx1P62960 Gm17968-201ENSMUST00000194902 784 ntBASIC16.12■□□□□ 0.17
Ybx1P62960 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.12■□□□□ 0.17
Ybx1P62960 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ybx1P62960 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ybx1P62960 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ybx1P62960 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ybx1P62960 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ybx1P62960 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ybx1P62960 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ybx1P62960 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ybx1P62960 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ybx1P62960 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.12■□□□□ 0.17
Ybx1P62960 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ybx1P62960 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ybx1P62960 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ybx1P62960 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.11■□□□□ 0.17
Ybx1P62960 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.11■□□□□ 0.17
Ybx1P62960 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ybx1P62960 Auts2-212ENSMUST00000178555 309 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms