Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm3P62311 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm3P62311 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm3P62311 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm3P62311 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.46□□□□□ -0.09
Lsm3P62311 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.46□□□□□ -0.09
Lsm3P62311 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.46□□□□□ -0.09
Lsm3P62311 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm3P62311 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm3P62311 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Lsm3P62311 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm3P62311 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Lsm3P62311 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.46□□□□□ -0.1
Lsm3P62311 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Lsm3P62311 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lsm3P62311 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lsm3P62311 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lsm3P62311 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lsm3P62311 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lsm3P62311 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.46□□□□□ -0.1
Lsm3P62311 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lsm3P62311 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.46□□□□□ -0.1
Lsm3P62311 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Lsm3P62311 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lsm3P62311 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.45□□□□□ -0.1
Lsm3P62311 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lsm3P62311 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.45□□□□□ -0.1
Lsm3P62311 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Lsm3P62311 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Lsm3P62311 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.45□□□□□ -0.1
Lsm3P62311 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Lsm3P62311 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lsm3P62311 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Lsm3P62311 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lsm3P62311 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.44□□□□□ -0.1
Lsm3P62311 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.44□□□□□ -0.1
Lsm3P62311 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Phf7-203ENSMUST00000226565 1971 ntBASIC14.44□□□□□ -0.1
Lsm3P62311 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Lsm3P62311 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Gm4968-201ENSMUST00000071458 858 ntBASIC14.44□□□□□ -0.1
Lsm3P62311 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Lsm3P62311 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.44□□□□□ -0.1
Lsm3P62311 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lsm3P62311 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm3P62311 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm3P62311 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm3P62311 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm3P62311 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.43□□□□□ -0.1
Lsm3P62311 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.43□□□□□ -0.1
Lsm3P62311 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm3P62311 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Lsm3P62311 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.43□□□□□ -0.1
Lsm3P62311 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.43□□□□□ -0.1
Lsm3P62311 Gm18025-201ENSMUST00000221733 862 ntBASIC14.43□□□□□ -0.1
Lsm3P62311 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms