Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmo4P61969 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmo4P61969 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmo4P61969 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.73□□□□□ -0.37
Lmo4P61969 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Lmo4P61969 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmo4P61969 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmo4P61969 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lmo4P61969 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmo4P61969 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lmo4P61969 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.73□□□□□ -0.37
Lmo4P61969 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmo4P61969 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmo4P61969 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmo4P61969 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmo4P61969 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lmo4P61969 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmo4P61969 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lmo4P61969 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.72□□□□□ -0.37
Lmo4P61969 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lmo4P61969 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.72□□□□□ -0.37
Lmo4P61969 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmo4P61969 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lmo4P61969 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Lmo4P61969 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.72□□□□□ -0.37
Lmo4P61969 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Lmo4P61969 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.72□□□□□ -0.37
Lmo4P61969 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lmo4P61969 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.72□□□□□ -0.37
Lmo4P61969 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lmo4P61969 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmo4P61969 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lmo4P61969 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmo4P61969 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lmo4P61969 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmo4P61969 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmo4P61969 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmo4P61969 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.72□□□□□ -0.37
Lmo4P61969 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmo4P61969 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lmo4P61969 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lmo4P61969 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmo4P61969 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmo4P61969 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmo4P61969 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmo4P61969 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.71□□□□□ -0.37
Lmo4P61969 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmo4P61969 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmo4P61969 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmo4P61969 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmo4P61969 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmo4P61969 Gm13597-201ENSMUST00000121239 375 ntBASIC12.71□□□□□ -0.37
Lmo4P61969 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.71□□□□□ -0.37
Lmo4P61969 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.71□□□□□ -0.37
Lmo4P61969 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Lmo4P61969 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lmo4P61969 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lmo4P61969 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.71□□□□□ -0.37
Lmo4P61969 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Lmo4P61969 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lmo4P61969 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lmo4P61969 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lmo4P61969 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.71□□□□□ -0.38
Lmo4P61969 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.71□□□□□ -0.38
Lmo4P61969 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.71□□□□□ -0.38
Lmo4P61969 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lmo4P61969 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lmo4P61969 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lmo4P61969 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lmo4P61969 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lmo4P61969 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmo4P61969 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Lmo4P61969 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmo4P61969 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmo4P61969 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmo4P61969 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.7□□□□□ -0.38
Lmo4P61969 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmo4P61969 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lmo4P61969 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmo4P61969 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmo4P61969 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.7□□□□□ -0.38
Lmo4P61969 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmo4P61969 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.7□□□□□ -0.38
Lmo4P61969 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lmo4P61969 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lmo4P61969 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmo4P61969 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lmo4P61969 Gm17271-201ENSMUST00000165535 355 ntBASIC12.7□□□□□ -0.38
Lmo4P61969 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.7□□□□□ -0.38
Lmo4P61969 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.7□□□□□ -0.38
Lmo4P61969 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.7□□□□□ -0.38
Lmo4P61969 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lmo4P61969 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Lmo4P61969 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lmo4P61969 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.7□□□□□ -0.38
Lmo4P61969 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmo4P61969 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.7□□□□□ -0.38
Lmo4P61969 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.7□□□□□ -0.38
Lmo4P61969 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lmo4P61969 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms