Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sf3b6P59708 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sf3b6P59708 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Sf3b6P59708 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sf3b6P59708 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.04□□□□□ -0.16
Sf3b6P59708 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.04□□□□□ -0.16
Sf3b6P59708 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b6P59708 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Sf3b6P59708 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.03□□□□□ -0.16
Sf3b6P59708 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sf3b6P59708 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sf3b6P59708 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sf3b6P59708 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.03□□□□□ -0.16
Sf3b6P59708 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.03□□□□□ -0.16
Sf3b6P59708 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.03□□□□□ -0.16
Sf3b6P59708 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Sf3b6P59708 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sf3b6P59708 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b6P59708 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sf3b6P59708 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b6P59708 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.02□□□□□ -0.16
Sf3b6P59708 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b6P59708 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b6P59708 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b6P59708 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b6P59708 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b6P59708 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b6P59708 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b6P59708 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b6P59708 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.02□□□□□ -0.16
Sf3b6P59708 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.02□□□□□ -0.16
Sf3b6P59708 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b6P59708 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b6P59708 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b6P59708 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b6P59708 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b6P59708 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b6P59708 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b6P59708 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Sf3b6P59708 Gm6433-201ENSMUST00000118634 875 ntBASIC14.02□□□□□ -0.17
Sf3b6P59708 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b6P59708 Gm43799-201ENSMUST00000201845 579 ntBASIC14.02□□□□□ -0.17
Sf3b6P59708 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.02□□□□□ -0.17
Sf3b6P59708 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b6P59708 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.02□□□□□ -0.17
Sf3b6P59708 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b6P59708 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b6P59708 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b6P59708 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b6P59708 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b6P59708 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b6P59708 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b6P59708 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sf3b6P59708 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3b6P59708 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms