Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup43P59235 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nup43P59235 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup43P59235 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Nup43P59235 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nup43P59235 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup43P59235 Gm27459-201ENSMUST00000184860 107 ntBASIC14.91□□□□□ -0.02
Nup43P59235 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.91□□□□□ -0.02
Nup43P59235 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup43P59235 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup43P59235 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.91□□□□□ -0.02
Nup43P59235 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup43P59235 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.91□□□□□ -0.02
Nup43P59235 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup43P59235 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup43P59235 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup43P59235 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup43P59235 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup43P59235 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.9□□□□□ -0.02
Nup43P59235 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.9□□□□□ -0.02
Nup43P59235 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 Gm7153-201ENSMUST00000117092 455 ntBASIC14.9□□□□□ -0.02
Nup43P59235 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.9□□□□□ -0.02
Nup43P59235 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.9□□□□□ -0.02
Nup43P59235 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.9□□□□□ -0.02
Nup43P59235 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nup43P59235 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nup43P59235 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Nup43P59235 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.89□□□□□ -0.03
Nup43P59235 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.89□□□□□ -0.03
Nup43P59235 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Nup43P59235 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup43P59235 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.89□□□□□ -0.03
Nup43P59235 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup43P59235 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nup43P59235 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup43P59235 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup43P59235 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup43P59235 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nup43P59235 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nup43P59235 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
Nup43P59235 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Nup43P59235 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup43P59235 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup43P59235 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup43P59235 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup43P59235 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.88□□□□□ -0.03
Nup43P59235 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.88□□□□□ -0.03
Nup43P59235 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.88□□□□□ -0.03
Nup43P59235 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.88□□□□□ -0.03
Nup43P59235 Gm8655-201ENSMUST00000221159 852 ntBASIC14.88□□□□□ -0.03
Nup43P59235 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.88□□□□□ -0.03
Nup43P59235 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.88□□□□□ -0.03
Nup43P59235 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.88□□□□□ -0.03
Nup43P59235 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nup43P59235 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup43P59235 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.88□□□□□ -0.03
Nup43P59235 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms