Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.66■□□□□ 0.58
Irf5P56477 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf5P56477 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf5P56477 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf5P56477 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Irf5P56477 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Irf5P56477 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Irf5P56477 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.66■□□□□ 0.58
Irf5P56477 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.66■□□□□ 0.58
Irf5P56477 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Irf5P56477 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Irf5P56477 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf5P56477 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf5P56477 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf5P56477 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf5P56477 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf5P56477 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf5P56477 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf5P56477 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf5P56477 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf5P56477 Gm10676-201ENSMUST00000098778 3221 ntBASIC18.65■□□□□ 0.58
Irf5P56477 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf5P56477 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Irf5P56477 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf5P56477 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Irf5P56477 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Irf5P56477 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.65■□□□□ 0.58
Irf5P56477 Gm13418-201ENSMUST00000119097 944 ntBASIC18.65■□□□□ 0.58
Irf5P56477 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.65■□□□□ 0.58
Irf5P56477 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.65■□□□□ 0.58
Irf5P56477 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf5P56477 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf5P56477 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.65■□□□□ 0.58
Irf5P56477 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf5P56477 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf5P56477 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.65■□□□□ 0.58
Irf5P56477 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Irf5P56477 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.65■□□□□ 0.58
Irf5P56477 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Irf5P56477 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Irf5P56477 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.64■□□□□ 0.58
Irf5P56477 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.64■□□□□ 0.57
Irf5P56477 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.64■□□□□ 0.57
Irf5P56477 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf5P56477 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf5P56477 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf5P56477 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Irf5P56477 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf5P56477 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.64■□□□□ 0.57
Irf5P56477 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.64■□□□□ 0.57
Irf5P56477 Gm14494-201ENSMUST00000118786 435 ntBASIC18.64■□□□□ 0.57
Irf5P56477 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Irf5P56477 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf5P56477 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.64■□□□□ 0.57
Irf5P56477 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
Irf5P56477 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.64■□□□□ 0.57
Irf5P56477 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
Irf5P56477 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.64■□□□□ 0.57
Irf5P56477 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.64■□□□□ 0.57
Irf5P56477 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.64■□□□□ 0.57
Irf5P56477 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf5P56477 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf5P56477 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Irf5P56477 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf5P56477 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf5P56477 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf5P56477 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf5P56477 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Irf5P56477 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.64■□□□□ 0.57
Irf5P56477 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf5P56477 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf5P56477 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf5P56477 Gm12260-201ENSMUST00000122447 411 ntBASIC18.63■□□□□ 0.57
Irf5P56477 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.63■□□□□ 0.57
Irf5P56477 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.63■□□□□ 0.57
Irf5P56477 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.63■□□□□ 0.57
Irf5P56477 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.63■□□□□ 0.57
Irf5P56477 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf5P56477 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.63■□□□□ 0.57
Irf5P56477 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Irf5P56477 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf5P56477 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf5P56477 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Irf5P56477 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf5P56477 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf5P56477 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Irf5P56477 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf5P56477 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Irf5P56477 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.62■□□□□ 0.57
Irf5P56477 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf5P56477 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf5P56477 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf5P56477 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.62■□□□□ 0.57
Irf5P56477 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.62■□□□□ 0.57
Irf5P56477 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.62■□□□□ 0.57
Irf5P56477 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.62■□□□□ 0.57
Irf5P56477 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.62■□□□□ 0.57
Irf5P56477 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf5P56477 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.62■□□□□ 0.57
Irf5P56477 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms