Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh11P55288 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cdh11P55288 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cdh11P55288 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.42□□□□□ -0.1
Cdh11P55288 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh11P55288 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Cdh11P55288 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh11P55288 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Cdh11P55288 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh11P55288 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh11P55288 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh11P55288 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh11P55288 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh11P55288 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh11P55288 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Cdh11P55288 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh11P55288 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh11P55288 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh11P55288 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh11P55288 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh11P55288 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh11P55288 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Cdh11P55288 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cdh11P55288 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cdh11P55288 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.41□□□□□ -0.1
Cdh11P55288 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.41□□□□□ -0.1
Cdh11P55288 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdh11P55288 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cdh11P55288 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdh11P55288 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh11P55288 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh11P55288 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdh11P55288 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh11P55288 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh11P55288 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdh11P55288 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh11P55288 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh11P55288 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh11P55288 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh11P55288 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh11P55288 Mir770-201ENSMUST00000103252 94 ntBASIC14.4□□□□□ -0.1
Cdh11P55288 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh11P55288 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cdh11P55288 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cdh11P55288 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh11P55288 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh11P55288 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.4□□□□□ -0.1
Cdh11P55288 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cdh11P55288 App-207ENSMUST00000227737 2827 ntBASIC14.4□□□□□ -0.1
Cdh11P55288 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdh11P55288 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh11P55288 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh11P55288 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh11P55288 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.4□□□□□ -0.1
Cdh11P55288 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh11P55288 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh11P55288 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Cdh11P55288 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cdh11P55288 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.39□□□□□ -0.11
Cdh11P55288 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.39□□□□□ -0.11
Cdh11P55288 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Cdh11P55288 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Cdh11P55288 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdh11P55288 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdh11P55288 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdh11P55288 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdh11P55288 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Cdh11P55288 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdh11P55288 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms