Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.99■□□□□ 0.31
Nub1P54729 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nub1P54729 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nub1P54729 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nub1P54729 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nub1P54729 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nub1P54729 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nub1P54729 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nub1P54729 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Nub1P54729 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nub1P54729 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Nub1P54729 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nub1P54729 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nub1P54729 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nub1P54729 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nub1P54729 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nub1P54729 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nub1P54729 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nub1P54729 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nub1P54729 Gm25745-201ENSMUST00000174945 133 ntBASIC16.98■□□□□ 0.31
Nub1P54729 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nub1P54729 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nub1P54729 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nub1P54729 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nub1P54729 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nub1P54729 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Nub1P54729 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nub1P54729 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nub1P54729 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Nub1P54729 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.97■□□□□ 0.31
Nub1P54729 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Nub1P54729 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Nub1P54729 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.97■□□□□ 0.31
Nub1P54729 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.97■□□□□ 0.31
Nub1P54729 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Nub1P54729 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.97■□□□□ 0.31
Nub1P54729 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.97■□□□□ 0.31
Nub1P54729 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.97■□□□□ 0.31
Nub1P54729 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Nub1P54729 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Nub1P54729 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.97■□□□□ 0.31
Nub1P54729 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Nub1P54729 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Nub1P54729 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nub1P54729 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nub1P54729 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Nub1P54729 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nub1P54729 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nub1P54729 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.96■□□□□ 0.31
Nub1P54729 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.96■□□□□ 0.31
Nub1P54729 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.96■□□□□ 0.31
Nub1P54729 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.96■□□□□ 0.31
Nub1P54729 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.96■□□□□ 0.31
Nub1P54729 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Nub1P54729 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.96■□□□□ 0.31
Nub1P54729 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nub1P54729 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.96■□□□□ 0.31
Nub1P54729 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.96■□□□□ 0.31
Nub1P54729 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.96■□□□□ 0.31
Nub1P54729 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Nub1P54729 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nub1P54729 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.96■□□□□ 0.31
Nub1P54729 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nub1P54729 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.96■□□□□ 0.31
Nub1P54729 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nub1P54729 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nub1P54729 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nub1P54729 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nub1P54729 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nub1P54729 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nub1P54729 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nub1P54729 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Nub1P54729 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nub1P54729 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nub1P54729 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.95■□□□□ 0.3
Nub1P54729 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Nub1P54729 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nub1P54729 Gm12644-201ENSMUST00000119935 606 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms