Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.61■□□□□ 0.09
Pdx1P52946 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pdx1P52946 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdx1P52946 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdx1P52946 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdx1P52946 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdx1P52946 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdx1P52946 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdx1P52946 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
Pdx1P52946 Gm4459-201ENSMUST00000118750 468 ntBASIC15.61■□□□□ 0.09
Pdx1P52946 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdx1P52946 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pdx1P52946 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdx1P52946 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pdx1P52946 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdx1P52946 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pdx1P52946 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdx1P52946 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdx1P52946 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdx1P52946 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdx1P52946 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdx1P52946 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pdx1P52946 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdx1P52946 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdx1P52946 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdx1P52946 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pdx1P52946 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Pdx1P52946 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdx1P52946 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.6■□□□□ 0.09
Pdx1P52946 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Pdx1P52946 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdx1P52946 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdx1P52946 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdx1P52946 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.6■□□□□ 0.09
Pdx1P52946 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Gm8825-201ENSMUST00000182565 998 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Gm4518-201ENSMUST00000182638 718 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdx1P52946 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdx1P52946 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdx1P52946 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Prob1-201ENSMUST00000097619 3021 ntBASIC15.6■□□□□ 0.09
Pdx1P52946 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdx1P52946 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdx1P52946 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Pdx1P52946 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pdx1P52946 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdx1P52946 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdx1P52946 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Pdx1P52946 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pdx1P52946 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pdx1P52946 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pdx1P52946 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdx1P52946 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdx1P52946 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.59■□□□□ 0.09
Pdx1P52946 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdx1P52946 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdx1P52946 Gm24589-201ENSMUST00000116692 94 ntBASIC15.59■□□□□ 0.09
Pdx1P52946 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.59■□□□□ 0.09
Pdx1P52946 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.59■□□□□ 0.09
Pdx1P52946 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.59■□□□□ 0.09
Pdx1P52946 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdx1P52946 Birc2-201ENSMUST00000054878 378 ntBASIC15.59■□□□□ 0.09
Pdx1P52946 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdx1P52946 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdx1P52946 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdx1P52946 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdx1P52946 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdx1P52946 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pdx1P52946 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pdx1P52946 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pdx1P52946 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pdx1P52946 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pdx1P52946 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdx1P52946 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pdx1P52946 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pdx1P52946 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.58■□□□□ 0.08
Pdx1P52946 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Pdx1P52946 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdx1P52946 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdx1P52946 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Pdx1P52946 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdx1P52946 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pdx1P52946 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdx1P52946 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pdx1P52946 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms