Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.72■□□□□ 0.59
Ercc3P49135 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc3P49135 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc3P49135 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc3P49135 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ercc3P49135 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc3P49135 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc3P49135 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc3P49135 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc3P49135 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc3P49135 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.72■□□□□ 0.59
Ercc3P49135 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ercc3P49135 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.71■□□□□ 0.59
Ercc3P49135 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ercc3P49135 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ercc3P49135 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.71■□□□□ 0.59
Ercc3P49135 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.71■□□□□ 0.59
Ercc3P49135 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 Gm6296-201ENSMUST00000222599 943 ntBASIC18.71■□□□□ 0.59
Ercc3P49135 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.71■□□□□ 0.59
Ercc3P49135 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc3P49135 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc3P49135 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ercc3P49135 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.7■□□□□ 0.58
Ercc3P49135 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.7■□□□□ 0.58
Ercc3P49135 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Ercc3P49135 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc3P49135 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc3P49135 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc3P49135 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.7■□□□□ 0.58
Ercc3P49135 Gm13884-201ENSMUST00000118103 829 ntBASIC18.7■□□□□ 0.58
Ercc3P49135 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc3P49135 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc3P49135 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.7■□□□□ 0.58
Ercc3P49135 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc3P49135 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ercc3P49135 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc3P49135 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc3P49135 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc3P49135 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc3P49135 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.7■□□□□ 0.58
Ercc3P49135 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc3P49135 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc3P49135 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc3P49135 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc3P49135 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ercc3P49135 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ercc3P49135 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ercc3P49135 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ercc3P49135 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ercc3P49135 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Ercc3P49135 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.69■□□□□ 0.58
Ercc3P49135 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc3P49135 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ercc3P49135 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ercc3P49135 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.68■□□□□ 0.58
Ercc3P49135 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ercc3P49135 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ercc3P49135 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Ercc3P49135 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Ercc3P49135 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ercc3P49135 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Ercc3P49135 Gm8097-201ENSMUST00000117903 829 ntBASIC18.68■□□□□ 0.58
Ercc3P49135 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.68■□□□□ 0.58
Ercc3P49135 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Ercc3P49135 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.68■□□□□ 0.58
Ercc3P49135 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ercc3P49135 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ercc3P49135 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms