Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx2P43241 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cdx2P43241 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx2P43241 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx2P43241 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.94□□□□□ -0.02
Cdx2P43241 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.94□□□□□ -0.02
Cdx2P43241 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx2P43241 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.94□□□□□ -0.02
Cdx2P43241 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx2P43241 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.94□□□□□ -0.02
Cdx2P43241 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx2P43241 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cdx2P43241 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx2P43241 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx2P43241 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.94□□□□□ -0.02
Cdx2P43241 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cdx2P43241 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx2P43241 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx2P43241 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx2P43241 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdx2P43241 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cdx2P43241 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.93□□□□□ -0.02
Cdx2P43241 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cdx2P43241 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
Cdx2P43241 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cdx2P43241 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cdx2P43241 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cdx2P43241 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Gm11745-201ENSMUST00000121669 448 ntBASIC14.93□□□□□ -0.02
Cdx2P43241 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.93□□□□□ -0.02
Cdx2P43241 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.93□□□□□ -0.02
Cdx2P43241 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cdx2P43241 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cdx2P43241 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdx2P43241 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdx2P43241 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdx2P43241 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdx2P43241 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.92□□□□□ -0.02
Cdx2P43241 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Cdx2P43241 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdx2P43241 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdx2P43241 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdx2P43241 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdx2P43241 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdx2P43241 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.92□□□□□ -0.02
Cdx2P43241 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.92□□□□□ -0.02
Cdx2P43241 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdx2P43241 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdx2P43241 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdx2P43241 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdx2P43241 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Cdx2P43241 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdx2P43241 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdx2P43241 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.92□□□□□ -0.02
Cdx2P43241 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdx2P43241 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cdx2P43241 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Cdx2P43241 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdx2P43241 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdx2P43241 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cdx2P43241 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdx2P43241 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cdx2P43241 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdx2P43241 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdx2P43241 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdx2P43241 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdx2P43241 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdx2P43241 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdx2P43241 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.91□□□□□ -0.02
Cdx2P43241 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdx2P43241 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdx2P43241 Thap2-203ENSMUST00000218989 527 ntBASIC14.91□□□□□ -0.02
Cdx2P43241 Gm18246-201ENSMUST00000221023 728 ntBASIC14.91□□□□□ -0.02
Cdx2P43241 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.91□□□□□ -0.02
Cdx2P43241 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdx2P43241 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdx2P43241 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Cdx2P43241 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cdx2P43241 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdx2P43241 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.91□□□□□ -0.02
Cdx2P43241 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cdx2P43241 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms