Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
HttP42859 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
HttP42859 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HttP42859 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HttP42859 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HttP42859 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HttP42859 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HttP42859 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HttP42859 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HttP42859 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HttP42859 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HttP42859 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.7■□□□□ 0.26
HttP42859 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HttP42859 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HttP42859 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.7■□□□□ 0.26
HttP42859 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HttP42859 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HttP42859 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
HttP42859 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HttP42859 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HttP42859 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HttP42859 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
HttP42859 Gm2272-201ENSMUST00000194903 582 ntBASIC16.7■□□□□ 0.26
HttP42859 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.7■□□□□ 0.26
HttP42859 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HttP42859 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HttP42859 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HttP42859 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HttP42859 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HttP42859 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HttP42859 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.69■□□□□ 0.26
HttP42859 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.69■□□□□ 0.26
HttP42859 Gm45331-201ENSMUST00000209868 554 ntBASIC16.69■□□□□ 0.26
HttP42859 Gm9908-201ENSMUST00000211534 448 ntBASIC16.69■□□□□ 0.26
HttP42859 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HttP42859 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HttP42859 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
HttP42859 Asic1-205ENSMUST00000228185 1818 ntBASIC16.69■□□□□ 0.26
HttP42859 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HttP42859 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HttP42859 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HttP42859 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HttP42859 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HttP42859 Haglr-201ENSMUST00000100000 2085 ntBASIC16.69■□□□□ 0.26
HttP42859 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.69■□□□□ 0.26
HttP42859 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HttP42859 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HttP42859 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HttP42859 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HttP42859 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.68■□□□□ 0.26
HttP42859 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
HttP42859 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.68■□□□□ 0.26
HttP42859 Mir3547-201ENSMUST00000175461 88 ntBASIC16.68■□□□□ 0.26
HttP42859 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.68■□□□□ 0.26
HttP42859 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.68■□□□□ 0.26
HttP42859 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.68■□□□□ 0.26
HttP42859 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HttP42859 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HttP42859 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
HttP42859 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HttP42859 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HttP42859 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HttP42859 Gm18827-201ENSMUST00000188341 790 ntBASIC16.68■□□□□ 0.26
HttP42859 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.68■□□□□ 0.26
HttP42859 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.68■□□□□ 0.26
HttP42859 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HttP42859 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HttP42859 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.68■□□□□ 0.26
HttP42859 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HttP42859 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HttP42859 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HttP42859 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HttP42859 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.68■□□□□ 0.26
HttP42859 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HttP42859 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HttP42859 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HttP42859 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HttP42859 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HttP42859 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HttP42859 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HttP42859 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HttP42859 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HttP42859 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HttP42859 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HttP42859 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HttP42859 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HttP42859 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HttP42859 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HttP42859 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.67■□□□□ 0.26
HttP42859 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HttP42859 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
HttP42859 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
HttP42859 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
HttP42859 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
HttP42859 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HttP42859 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
HttP42859 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HttP42859 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HttP42859 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HttP42859 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms