Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.47□□□□□ -0.09
Nkx2-2P42586 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-2P42586 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-2P42586 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-2P42586 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-2P42586 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-2P42586 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-2P42586 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.46□□□□□ -0.09
Nkx2-2P42586 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Gm18622-201ENSMUST00000219361 595 ntBASIC14.46□□□□□ -0.09
Nkx2-2P42586 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.46□□□□□ -0.09
Nkx2-2P42586 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.46□□□□□ -0.09
Nkx2-2P42586 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-2P42586 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-2P42586 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.46□□□□□ -0.1
Nkx2-2P42586 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-2P42586 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nkx2-2P42586 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Gm8655-201ENSMUST00000221159 852 ntBASIC14.45□□□□□ -0.1
Nkx2-2P42586 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nkx2-2P42586 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.45□□□□□ -0.1
Nkx2-2P42586 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nkx2-2P42586 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx2-2P42586 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.44□□□□□ -0.1
Nkx2-2P42586 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.44□□□□□ -0.1
Nkx2-2P42586 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms