Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Sox6P40645 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Sox6P40645 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Sox6P40645 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.86□□□□□ -0.03
Sox6P40645 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Sox6P40645 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Sox6P40645 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Sox6P40645 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.86□□□□□ -0.03
Sox6P40645 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Sox6P40645 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.85□□□□□ -0.03
Sox6P40645 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.85□□□□□ -0.03
Sox6P40645 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.85□□□□□ -0.03
Sox6P40645 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Sox6P40645 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.85□□□□□ -0.03
Sox6P40645 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
Sox6P40645 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.85□□□□□ -0.03
Sox6P40645 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.85□□□□□ -0.03
Sox6P40645 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox6P40645 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sox6P40645 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Sox6P40645 Gm6659-201ENSMUST00000174752 547 ntBASIC14.84□□□□□ -0.03
Sox6P40645 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.84□□□□□ -0.03
Sox6P40645 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sox6P40645 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox6P40645 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.84□□□□□ -0.03
Sox6P40645 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Sox6P40645 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox6P40645 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox6P40645 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.03
Sox6P40645 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox6P40645 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.83□□□□□ -0.04
Sox6P40645 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox6P40645 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox6P40645 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.83□□□□□ -0.04
Sox6P40645 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Sox6P40645 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Sox6P40645 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox6P40645 Gm9013-201ENSMUST00000132939 882 ntBASIC14.83□□□□□ -0.04
Sox6P40645 Gm25016-201ENSMUST00000158399 131 ntBASIC14.83□□□□□ -0.04
Sox6P40645 Gm37722-201ENSMUST00000193757 208 ntBASIC14.83□□□□□ -0.04
Sox6P40645 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox6P40645 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox6P40645 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox6P40645 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox6P40645 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox6P40645 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms