Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HmgclP38060 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HmgclP38060 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HmgclP38060 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HmgclP38060 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HmgclP38060 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.55■□□□□ 0.08
HmgclP38060 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HmgclP38060 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HmgclP38060 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HmgclP38060 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HmgclP38060 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HmgclP38060 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HmgclP38060 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
HmgclP38060 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HmgclP38060 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HmgclP38060 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.54■□□□□ 0.08
HmgclP38060 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.54■□□□□ 0.08
HmgclP38060 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HmgclP38060 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HmgclP38060 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HmgclP38060 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HmgclP38060 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
HmgclP38060 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HmgclP38060 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HmgclP38060 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HmgclP38060 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.54■□□□□ 0.08
HmgclP38060 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.54■□□□□ 0.08
HmgclP38060 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.54■□□□□ 0.08
HmgclP38060 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HmgclP38060 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HmgclP38060 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HmgclP38060 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HmgclP38060 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HmgclP38060 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HmgclP38060 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HmgclP38060 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.54■□□□□ 0.08
HmgclP38060 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HmgclP38060 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.53■□□□□ 0.08
HmgclP38060 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HmgclP38060 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HmgclP38060 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HmgclP38060 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HmgclP38060 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.53■□□□□ 0.08
HmgclP38060 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.53■□□□□ 0.08
HmgclP38060 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.53■□□□□ 0.08
HmgclP38060 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HmgclP38060 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
HmgclP38060 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HmgclP38060 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HmgclP38060 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HmgclP38060 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HmgclP38060 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HmgclP38060 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HmgclP38060 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HmgclP38060 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HmgclP38060 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.53■□□□□ 0.08
HmgclP38060 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HmgclP38060 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HmgclP38060 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HmgclP38060 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HmgclP38060 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HmgclP38060 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HmgclP38060 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HmgclP38060 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HmgclP38060 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HmgclP38060 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HmgclP38060 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HmgclP38060 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
HmgclP38060 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HmgclP38060 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.52■□□□□ 0.08
HmgclP38060 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HmgclP38060 Gm18622-201ENSMUST00000219361 595 ntBASIC15.52■□□□□ 0.08
HmgclP38060 Gm8655-201ENSMUST00000221159 852 ntBASIC15.52■□□□□ 0.08
HmgclP38060 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
HmgclP38060 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.52■□□□□ 0.08
HmgclP38060 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.52■□□□□ 0.08
HmgclP38060 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HmgclP38060 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HmgclP38060 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HmgclP38060 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
HmgclP38060 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HmgclP38060 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HmgclP38060 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
HmgclP38060 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HmgclP38060 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
HmgclP38060 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HmgclP38060 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HmgclP38060 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HmgclP38060 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HmgclP38060 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HmgclP38060 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.51■□□□□ 0.07
HmgclP38060 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
HmgclP38060 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HmgclP38060 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HmgclP38060 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.51■□□□□ 0.07
HmgclP38060 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HmgclP38060 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HmgclP38060 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HmgclP38060 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HmgclP38060 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms