Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.01■□□□□ 0.31
Irf8P23611 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Irf8P23611 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Irf8P23611 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf8P23611 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Irf8P23611 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf8P23611 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf8P23611 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Irf8P23611 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Irf8P23611 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17■□□□□ 0.31
Irf8P23611 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf8P23611 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf8P23611 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Irf8P23611 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17■□□□□ 0.31
Irf8P23611 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Irf8P23611 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17■□□□□ 0.31
Irf8P23611 Gm11780-201ENSMUST00000136880 516 ntBASIC17■□□□□ 0.31
Irf8P23611 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17■□□□□ 0.31
Irf8P23611 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17■□□□□ 0.31
Irf8P23611 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf8P23611 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Irf8P23611 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Irf8P23611 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Irf8P23611 Rps4l-201ENSMUST00000071745 943 ntBASIC17■□□□□ 0.31
Irf8P23611 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf8P23611 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
Irf8P23611 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17■□□□□ 0.31
Irf8P23611 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17■□□□□ 0.31
Irf8P23611 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf8P23611 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf8P23611 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Irf8P23611 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf8P23611 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.99■□□□□ 0.31
Irf8P23611 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Irf8P23611 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf8P23611 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf8P23611 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.99■□□□□ 0.31
Irf8P23611 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Irf8P23611 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.99■□□□□ 0.31
Irf8P23611 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Irf8P23611 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Irf8P23611 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.99■□□□□ 0.31
Irf8P23611 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf8P23611 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Irf8P23611 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Irf8P23611 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf8P23611 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf8P23611 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.99■□□□□ 0.31
Irf8P23611 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf8P23611 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf8P23611 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Irf8P23611 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Irf8P23611 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Irf8P23611 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Irf8P23611 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Irf8P23611 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.98■□□□□ 0.31
Irf8P23611 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Irf8P23611 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Irf8P23611 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Irf8P23611 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.98■□□□□ 0.31
Irf8P23611 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Irf8P23611 Gm14722-201ENSMUST00000118943 689 ntBASIC16.98■□□□□ 0.31
Irf8P23611 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Irf8P23611 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Irf8P23611 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.98■□□□□ 0.31
Irf8P23611 Gm6296-201ENSMUST00000222599 943 ntBASIC16.98■□□□□ 0.31
Irf8P23611 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Irf8P23611 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Irf8P23611 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Irf8P23611 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Irf8P23611 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Irf8P23611 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Irf8P23611 Prob1-201ENSMUST00000097619 3021 ntBASIC16.98■□□□□ 0.31
Irf8P23611 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Irf8P23611 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Irf8P23611 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Irf8P23611 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Irf8P23611 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Irf8P23611 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Irf8P23611 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Irf8P23611 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Irf8P23611 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Irf8P23611 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Irf8P23611 Gm15358-201ENSMUST00000119249 520 ntBASIC16.97■□□□□ 0.31
Irf8P23611 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Irf8P23611 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.97■□□□□ 0.31
Irf8P23611 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.97■□□□□ 0.31
Irf8P23611 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Irf8P23611 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Irf8P23611 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Irf8P23611 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Irf8P23611 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Irf8P23611 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Irf8P23611 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Irf8P23611 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Irf8P23611 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms