Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prim1P20664 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Prim1P20664 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
Prim1P20664 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Prim1P20664 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prim1P20664 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prim1P20664 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Prim1P20664 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.02■□□□□ 0.8
Prim1P20664 Gm25911-201ENSMUST00000157621 56 ntBASIC20.02■□□□□ 0.8
Prim1P20664 Gm9682-201ENSMUST00000197505 556 ntBASIC20.02■□□□□ 0.8
Prim1P20664 AC158538.2-201ENSMUST00000225455 906 ntBASIC20.02■□□□□ 0.8
Prim1P20664 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prim1P20664 Gm10175-201ENSMUST00000086013 645 ntBASIC20.02■□□□□ 0.8
Prim1P20664 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prim1P20664 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Prim1P20664 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prim1P20664 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prim1P20664 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prim1P20664 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prim1P20664 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prim1P20664 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prim1P20664 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prim1P20664 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prim1P20664 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prim1P20664 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Prim1P20664 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Prim1P20664 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
Prim1P20664 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Prim1P20664 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
Prim1P20664 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.01■□□□□ 0.79
Prim1P20664 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Prim1P20664 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC20.01■□□□□ 0.79
Prim1P20664 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.01■□□□□ 0.79
Prim1P20664 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.01■□□□□ 0.79
Prim1P20664 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Prim1P20664 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prim1P20664 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Prim1P20664 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prim1P20664 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prim1P20664 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prim1P20664 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prim1P20664 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prim1P20664 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prim1P20664 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prim1P20664 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prim1P20664 Best4-ps-201ENSMUST00000129783 1380 ntBASIC20■□□□□ 0.79
Prim1P20664 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20■□□□□ 0.79
Prim1P20664 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prim1P20664 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC20■□□□□ 0.79
Prim1P20664 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20■□□□□ 0.79
Prim1P20664 Gm13597-201ENSMUST00000121239 375 ntBASIC20■□□□□ 0.79
Prim1P20664 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prim1P20664 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20■□□□□ 0.79
Prim1P20664 CT943659.1-201ENSMUST00000215459 326 ntBASIC20■□□□□ 0.79
Prim1P20664 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC20■□□□□ 0.79
Prim1P20664 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prim1P20664 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20■□□□□ 0.79
Prim1P20664 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Prim1P20664 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prim1P20664 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prim1P20664 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20■□□□□ 0.79
Prim1P20664 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Prim1P20664 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prim1P20664 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prim1P20664 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Prim1P20664 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prim1P20664 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Prim1P20664 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prim1P20664 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.99■□□□□ 0.79
Prim1P20664 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prim1P20664 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prim1P20664 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prim1P20664 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prim1P20664 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prim1P20664 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prim1P20664 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prim1P20664 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.99■□□□□ 0.79
Prim1P20664 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.99■□□□□ 0.79
Prim1P20664 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms