Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl1P10146 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl1P10146 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl1P10146 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl1P10146 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccl1P10146 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl1P10146 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccl1P10146 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl1P10146 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl1P10146 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl1P10146 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl1P10146 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl1P10146 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl1P10146 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccl1P10146 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl1P10146 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Ccl1P10146 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl1P10146 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl1P10146 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl1P10146 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Ccl1P10146 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl1P10146 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.3□□□□□ -0.44
Ccl1P10146 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccl1P10146 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccl1P10146 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccl1P10146 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccl1P10146 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccl1P10146 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccl1P10146 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccl1P10146 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccl1P10146 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.29□□□□□ -0.44
Ccl1P10146 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccl1P10146 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Ccl1P10146 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.29□□□□□ -0.44
Ccl1P10146 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
Ccl1P10146 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccl1P10146 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 BC037039-201ENSMUST00000192003 2205 ntBASIC12.29□□□□□ -0.44
Ccl1P10146 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl1P10146 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Ccl1P10146 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccl1P10146 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccl1P10146 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccl1P10146 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccl1P10146 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.28□□□□□ -0.44
Ccl1P10146 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccl1P10146 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccl1P10146 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccl1P10146 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Ccl1P10146 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccl1P10146 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ccl1P10146 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms