Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h2P0C090 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Rc3h2P0C090 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rc3h2P0C090 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rc3h2P0C090 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h2P0C090 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h2P0C090 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h2P0C090 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h2P0C090 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Rc3h2P0C090 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h2P0C090 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h2P0C090 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h2P0C090 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h2P0C090 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.02■□□□□ 0.16
Rc3h2P0C090 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h2P0C090 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.02■□□□□ 0.16
Rc3h2P0C090 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.02■□□□□ 0.16
Rc3h2P0C090 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.02■□□□□ 0.16
Rc3h2P0C090 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.02■□□□□ 0.16
Rc3h2P0C090 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h2P0C090 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.02■□□□□ 0.16
Rc3h2P0C090 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rc3h2P0C090 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rc3h2P0C090 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rc3h2P0C090 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rc3h2P0C090 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rc3h2P0C090 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rc3h2P0C090 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.01■□□□□ 0.15
Rc3h2P0C090 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rc3h2P0C090 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h2P0C090 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h2P0C090 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h2P0C090 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rc3h2P0C090 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h2P0C090 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h2P0C090 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rc3h2P0C090 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h2P0C090 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rc3h2P0C090 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16■□□□□ 0.15
Rc3h2P0C090 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rc3h2P0C090 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h2P0C090 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16■□□□□ 0.15
Rc3h2P0C090 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16■□□□□ 0.15
Rc3h2P0C090 Gm45167-201ENSMUST00000208007 322 ntBASIC16■□□□□ 0.15
Rc3h2P0C090 Gm19164-201ENSMUST00000210667 640 ntBASIC16■□□□□ 0.15
Rc3h2P0C090 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h2P0C090 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h2P0C090 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h2P0C090 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rc3h2P0C090 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rc3h2P0C090 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms