Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Gm25990-201ENSMUST00000102440 86 ntBASIC12.26□□□□□ -0.45
Hoxd3P09027 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Mir5131-201ENSMUST00000175426 93 ntBASIC12.26□□□□□ -0.45
Hoxd3P09027 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.26□□□□□ -0.45
Hoxd3P09027 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.26□□□□□ -0.45
Hoxd3P09027 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.26□□□□□ -0.45
Hoxd3P09027 Gm18515-201ENSMUST00000219755 797 ntBASIC12.26□□□□□ -0.45
Hoxd3P09027 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hoxd3P09027 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hoxd3P09027 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxd3P09027 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hoxd3P09027 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd3P09027 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hoxd3P09027 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Hoxd3P09027 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.25□□□□□ -0.45
Hoxd3P09027 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Gm6443-201ENSMUST00000203599 874 ntBASIC12.25□□□□□ -0.45
Hoxd3P09027 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.25□□□□□ -0.45
Hoxd3P09027 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.25□□□□□ -0.45
Hoxd3P09027 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.25□□□□□ -0.45
Hoxd3P09027 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxd3P09027 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.25□□□□□ -0.45
Hoxd3P09027 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.25□□□□□ -0.45
Hoxd3P09027 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd3P09027 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.24□□□□□ -0.45
Hoxd3P09027 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxd3P09027 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.24□□□□□ -0.45
Hoxd3P09027 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.24□□□□□ -0.45
Hoxd3P09027 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.24□□□□□ -0.45
Hoxd3P09027 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm8825-201ENSMUST00000182565 998 ntBASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm4518-201ENSMUST00000182638 718 ntBASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.24□□□□□ -0.45
Hoxd3P09027 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Hoxd3P09027 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.24□□□□□ -0.45
Hoxd3P09027 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hoxd3P09027 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.24□□□□□ -0.45
Hoxd3P09027 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxd3P09027 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms