Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CopeO89079 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CopeO89079 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CopeO89079 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CopeO89079 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CopeO89079 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopeO89079 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopeO89079 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CopeO89079 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopeO89079 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.32■□□□□ 0.2
CopeO89079 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopeO89079 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopeO89079 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopeO89079 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CopeO89079 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopeO89079 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopeO89079 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopeO89079 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopeO89079 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopeO89079 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopeO89079 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CopeO89079 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopeO89079 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CopeO89079 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CopeO89079 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CopeO89079 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.31■□□□□ 0.2
CopeO89079 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.31■□□□□ 0.2
CopeO89079 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CopeO89079 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.31■□□□□ 0.2
CopeO89079 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.31■□□□□ 0.2
CopeO89079 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.31■□□□□ 0.2
CopeO89079 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.31■□□□□ 0.2
CopeO89079 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.31■□□□□ 0.2
CopeO89079 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CopeO89079 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CopeO89079 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.31■□□□□ 0.2
CopeO89079 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CopeO89079 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.31■□□□□ 0.2
CopeO89079 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CopeO89079 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CopeO89079 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CopeO89079 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CopeO89079 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CopeO89079 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CopeO89079 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CopeO89079 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CopeO89079 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CopeO89079 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.3■□□□□ 0.2
CopeO89079 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CopeO89079 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CopeO89079 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CopeO89079 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.3■□□□□ 0.2
CopeO89079 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CopeO89079 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CopeO89079 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.3■□□□□ 0.2
CopeO89079 Gm13436-201ENSMUST00000120418 567 ntBASIC16.3■□□□□ 0.2
CopeO89079 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.3■□□□□ 0.2
CopeO89079 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CopeO89079 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CopeO89079 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CopeO89079 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.3■□□□□ 0.2
CopeO89079 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CopeO89079 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CopeO89079 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CopeO89079 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CopeO89079 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
CopeO89079 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CopeO89079 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
CopeO89079 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CopeO89079 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.29■□□□□ 0.2
CopeO89079 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CopeO89079 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.29■□□□□ 0.2
CopeO89079 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.29■□□□□ 0.2
CopeO89079 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.29■□□□□ 0.2
CopeO89079 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CopeO89079 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.29■□□□□ 0.2
CopeO89079 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CopeO89079 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CopeO89079 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
CopeO89079 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CopeO89079 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms