Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hcn3O88705 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hcn3O88705 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hcn3O88705 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hcn3O88705 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hcn3O88705 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn3O88705 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn3O88705 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Hcn3O88705 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn3O88705 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.15■□□□□ 0.02
Hcn3O88705 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Hcn3O88705 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn3O88705 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn3O88705 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn3O88705 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.15■□□□□ 0.02
Hcn3O88705 Gm11539-201ENSMUST00000119837 557 ntBASIC15.15■□□□□ 0.02
Hcn3O88705 Gm13436-201ENSMUST00000120418 567 ntBASIC15.15■□□□□ 0.02
Hcn3O88705 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.15■□□□□ 0.02
Hcn3O88705 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn3O88705 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn3O88705 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn3O88705 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn3O88705 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn3O88705 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn3O88705 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn3O88705 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn3O88705 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn3O88705 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn3O88705 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Hcn3O88705 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn3O88705 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn3O88705 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn3O88705 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.14■□□□□ 0.01
Hcn3O88705 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.14■□□□□ 0.01
Hcn3O88705 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.14■□□□□ 0.01
Hcn3O88705 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Hcn3O88705 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn3O88705 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn3O88705 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.14■□□□□ 0.01
Hcn3O88705 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn3O88705 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn3O88705 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn3O88705 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn3O88705 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn3O88705 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn3O88705 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn3O88705 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn3O88705 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.13■□□□□ 0.01
Hcn3O88705 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hcn3O88705 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.13■□□□□ 0.01
Hcn3O88705 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.13■□□□□ 0.01
Hcn3O88705 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Mir7071-201ENSMUST00000184847 69 ntBASIC15.13■□□□□ 0.01
Hcn3O88705 Gm43799-201ENSMUST00000201845 579 ntBASIC15.13■□□□□ 0.01
Hcn3O88705 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hcn3O88705 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.13■□□□□ 0.01
Hcn3O88705 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Hcn3O88705 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.13■□□□□ 0.01
Hcn3O88705 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Hcn3O88705 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn3O88705 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
Hcn3O88705 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn3O88705 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Hcn3O88705 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn3O88705 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Hcn3O88705 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn3O88705 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn3O88705 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.12■□□□□ 0.01
Hcn3O88705 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn3O88705 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn3O88705 Gm13559-201ENSMUST00000120476 863 ntBASIC15.12■□□□□ 0.01
Hcn3O88705 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.12■□□□□ 0.01
Hcn3O88705 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn3O88705 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.12■□□□□ 0.01
Hcn3O88705 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn3O88705 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Hcn3O88705 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Hcn3O88705 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Hcn3O88705 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.12■□□□□ 0.01
Hcn3O88705 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn3O88705 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms