Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sema3fO88632 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sema3fO88632 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Sema3fO88632 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sema3fO88632 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sema3fO88632 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sema3fO88632 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sema3fO88632 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sema3fO88632 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sema3fO88632 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sema3fO88632 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sema3fO88632 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sema3fO88632 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sema3fO88632 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sema3fO88632 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sema3fO88632 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sema3fO88632 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sema3fO88632 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sema3fO88632 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Sema3fO88632 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.16■□□□□ 0.5
Sema3fO88632 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.16■□□□□ 0.5
Sema3fO88632 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.16■□□□□ 0.5
Sema3fO88632 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sema3fO88632 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.16■□□□□ 0.5
Sema3fO88632 Gm44487-201ENSMUST00000205145 325 ntBASIC18.16■□□□□ 0.5
Sema3fO88632 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sema3fO88632 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sema3fO88632 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sema3fO88632 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sema3fO88632 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sema3fO88632 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3fO88632 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3fO88632 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3fO88632 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3fO88632 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.15■□□□□ 0.5
Sema3fO88632 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3fO88632 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.15■□□□□ 0.5
Sema3fO88632 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.15■□□□□ 0.5
Sema3fO88632 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3fO88632 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3fO88632 Gm25911-201ENSMUST00000157621 56 ntBASIC18.15■□□□□ 0.5
Sema3fO88632 Gm27300-201ENSMUST00000184085 97 ntBASIC18.15■□□□□ 0.5
Sema3fO88632 Gm27335-201ENSMUST00000184758 97 ntBASIC18.15■□□□□ 0.5
Sema3fO88632 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3fO88632 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.15■□□□□ 0.5
Sema3fO88632 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.15■□□□□ 0.5
Sema3fO88632 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Sema3fO88632 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3fO88632 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3fO88632 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3fO88632 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3fO88632 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.15■□□□□ 0.5
Sema3fO88632 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sema3fO88632 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.15■□□□□ 0.5
Sema3fO88632 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.15■□□□□ 0.5
Sema3fO88632 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3fO88632 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sema3fO88632 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.14■□□□□ 0.5
Sema3fO88632 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Sema3fO88632 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sema3fO88632 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sema3fO88632 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sema3fO88632 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sema3fO88632 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sema3fO88632 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sema3fO88632 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sema3fO88632 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sema3fO88632 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.14■□□□□ 0.49
Sema3fO88632 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.14■□□□□ 0.49
Sema3fO88632 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sema3fO88632 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sema3fO88632 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Sema3fO88632 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sema3fO88632 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sema3fO88632 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sema3fO88632 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.14■□□□□ 0.49
Sema3fO88632 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sema3fO88632 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sema3fO88632 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sema3fO88632 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.13■□□□□ 0.49
Sema3fO88632 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sema3fO88632 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sema3fO88632 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sema3fO88632 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Sema3fO88632 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sema3fO88632 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Sema3fO88632 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.13■□□□□ 0.49
Sema3fO88632 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sema3fO88632 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sema3fO88632 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sema3fO88632 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sema3fO88632 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sema3fO88632 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.13■□□□□ 0.49
Sema3fO88632 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.13■□□□□ 0.49
Sema3fO88632 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.13■□□□□ 0.49
Sema3fO88632 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sema3fO88632 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sema3fO88632 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sema3fO88632 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sema3fO88632 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms