Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.29□□□□□ -0.12
Lmx1bO88609 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.29□□□□□ -0.12
Lmx1bO88609 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.29□□□□□ -0.12
Lmx1bO88609 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Lmx1bO88609 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.29□□□□□ -0.12
Lmx1bO88609 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.29□□□□□ -0.12
Lmx1bO88609 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.29□□□□□ -0.12
Lmx1bO88609 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lmx1bO88609 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lmx1bO88609 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lmx1bO88609 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lmx1bO88609 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.28□□□□□ -0.12
Lmx1bO88609 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Lmx1bO88609 Gm25406-201ENSMUST00000157599 105 ntBASIC14.28□□□□□ -0.12
Lmx1bO88609 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lmx1bO88609 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lmx1bO88609 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Lmx1bO88609 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lmx1bO88609 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmx1bO88609 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lmx1bO88609 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lmx1bO88609 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmx1bO88609 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.28□□□□□ -0.12
Lmx1bO88609 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.28□□□□□ -0.12
Lmx1bO88609 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmx1bO88609 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lmx1bO88609 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Lmx1bO88609 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmx1bO88609 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lmx1bO88609 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmx1bO88609 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmx1bO88609 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmx1bO88609 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmx1bO88609 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmx1bO88609 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Lmx1bO88609 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmx1bO88609 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmx1bO88609 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lmx1bO88609 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lmx1bO88609 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmx1bO88609 Gm12497-201ENSMUST00000138778 237 ntBASIC14.27□□□□□ -0.13
Lmx1bO88609 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.27□□□□□ -0.13
Lmx1bO88609 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmx1bO88609 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lmx1bO88609 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.27□□□□□ -0.13
Lmx1bO88609 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.27□□□□□ -0.13
Lmx1bO88609 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmx1bO88609 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmx1bO88609 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.27□□□□□ -0.13
Lmx1bO88609 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmx1bO88609 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmx1bO88609 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmx1bO88609 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Lmx1bO88609 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmx1bO88609 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lmx1bO88609 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmx1bO88609 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmx1bO88609 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmx1bO88609 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmx1bO88609 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmx1bO88609 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lmx1bO88609 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lmx1bO88609 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Lmx1bO88609 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lmx1bO88609 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.26□□□□□ -0.13
Lmx1bO88609 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Lmx1bO88609 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Gm12350-201ENSMUST00000121208 462 ntBASIC14.26□□□□□ -0.13
Lmx1bO88609 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.26□□□□□ -0.13
Lmx1bO88609 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Lmx1bO88609 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Lmx1bO88609 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmx1bO88609 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms