Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfdp1O88271 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfdp1O88271 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cfdp1O88271 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.64■□□□□ 0.73
Cfdp1O88271 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cfdp1O88271 Mir5126-201ENSMUST00000175513 77 ntBASIC19.64■□□□□ 0.73
Cfdp1O88271 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
Cfdp1O88271 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.64■□□□□ 0.73
Cfdp1O88271 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
Cfdp1O88271 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.64■□□□□ 0.73
Cfdp1O88271 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Cfdp1O88271 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfdp1O88271 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfdp1O88271 Gm15590-201ENSMUST00000078419 552 ntBASIC19.64■□□□□ 0.73
Cfdp1O88271 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfdp1O88271 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Cfdp1O88271 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cfdp1O88271 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cfdp1O88271 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cfdp1O88271 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cfdp1O88271 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Cfdp1O88271 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfdp1O88271 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfdp1O88271 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfdp1O88271 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cfdp1O88271 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfdp1O88271 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfdp1O88271 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfdp1O88271 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Gm8344-201ENSMUST00000119813 856 ntBASIC19.63■□□□□ 0.73
Cfdp1O88271 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.63■□□□□ 0.73
Cfdp1O88271 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Cfdp1O88271 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfdp1O88271 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Cfdp1O88271 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.62■□□□□ 0.73
Cfdp1O88271 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cfdp1O88271 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfdp1O88271 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cfdp1O88271 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfdp1O88271 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cfdp1O88271 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cfdp1O88271 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cfdp1O88271 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfdp1O88271 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfdp1O88271 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfdp1O88271 Gm7222-201ENSMUST00000117512 906 ntBASIC19.62■□□□□ 0.73
Cfdp1O88271 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Cfdp1O88271 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cfdp1O88271 AV026068-213ENSMUST00000223675 1171 ntBASIC19.62■□□□□ 0.73
Cfdp1O88271 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfdp1O88271 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cfdp1O88271 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfdp1O88271 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfdp1O88271 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfdp1O88271 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.62■□□□□ 0.73
Cfdp1O88271 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.62■□□□□ 0.73
Cfdp1O88271 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfdp1O88271 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfdp1O88271 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfdp1O88271 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfdp1O88271 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cfdp1O88271 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfdp1O88271 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfdp1O88271 Gm43514-201ENSMUST00000198852 424 ntBASIC19.61■□□□□ 0.73
Cfdp1O88271 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfdp1O88271 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.61■□□□□ 0.73
Cfdp1O88271 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Cfdp1O88271 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfdp1O88271 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.61■□□□□ 0.73
Cfdp1O88271 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfdp1O88271 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cfdp1O88271 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfdp1O88271 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfdp1O88271 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfdp1O88271 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfdp1O88271 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfdp1O88271 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cfdp1O88271 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.6■□□□□ 0.73
Cfdp1O88271 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfdp1O88271 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.6■□□□□ 0.73
Cfdp1O88271 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfdp1O88271 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfdp1O88271 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms