Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccr6O54689 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccr6O54689 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccr6O54689 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccr6O54689 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccr6O54689 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccr6O54689 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccr6O54689 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccr6O54689 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccr6O54689 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccr6O54689 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccr6O54689 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccr6O54689 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.29□□□□□ -0.28
Ccr6O54689 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccr6O54689 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccr6O54689 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccr6O54689 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccr6O54689 Efs-202ENSMUST00000227037 2540 ntBASIC13.29□□□□□ -0.28
Ccr6O54689 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccr6O54689 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccr6O54689 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccr6O54689 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccr6O54689 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccr6O54689 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccr6O54689 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.28□□□□□ -0.28
Ccr6O54689 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccr6O54689 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ccr6O54689 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccr6O54689 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccr6O54689 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ccr6O54689 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ccr6O54689 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccr6O54689 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ccr6O54689 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccr6O54689 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccr6O54689 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccr6O54689 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccr6O54689 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccr6O54689 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccr6O54689 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.27□□□□□ -0.28
Ccr6O54689 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccr6O54689 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccr6O54689 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccr6O54689 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccr6O54689 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccr6O54689 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ccr6O54689 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccr6O54689 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccr6O54689 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccr6O54689 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccr6O54689 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.27□□□□□ -0.29
Ccr6O54689 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccr6O54689 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccr6O54689 Gm18666-201ENSMUST00000190039 958 ntBASIC13.27□□□□□ -0.29
Ccr6O54689 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccr6O54689 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccr6O54689 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccr6O54689 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccr6O54689 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccr6O54689 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
Ccr6O54689 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccr6O54689 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccr6O54689 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccr6O54689 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccr6O54689 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccr6O54689 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccr6O54689 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccr6O54689 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ccr6O54689 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ccr6O54689 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccr6O54689 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Ccr6O54689 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccr6O54689 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccr6O54689 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ccr6O54689 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccr6O54689 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ccr6O54689 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccr6O54689 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Ccr6O54689 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccr6O54689 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccr6O54689 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms