Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Gm44359-201ENSMUST00000200671 138 ntBASIC16.93■□□□□ 0.3
Usp35M0QWN7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.93■□□□□ 0.3
Usp35M0QWN7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp35M0QWN7 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.93■□□□□ 0.3
Usp35M0QWN7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp35M0QWN7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp35M0QWN7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp35M0QWN7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp35M0QWN7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp35M0QWN7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Usp35M0QWN7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp35M0QWN7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp35M0QWN7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Usp35M0QWN7 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Usp35M0QWN7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Usp35M0QWN7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Usp35M0QWN7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp35M0QWN7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.91■□□□□ 0.3
Usp35M0QWN7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.91■□□□□ 0.3
Usp35M0QWN7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp35M0QWN7 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.9■□□□□ 0.3
Usp35M0QWN7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.9■□□□□ 0.3
Usp35M0QWN7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.9■□□□□ 0.3
Usp35M0QWN7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp35M0QWN7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Usp35M0QWN7 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.89■□□□□ 0.3
Usp35M0QWN7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.89■□□□□ 0.3
Usp35M0QWN7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.89■□□□□ 0.29
Usp35M0QWN7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp35M0QWN7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms