Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Grk6-207ENSMUST00000225925 2769 ntBASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Gm22175-201ENSMUST00000175007 78 ntBASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
B020004C17RikJ3QP07 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Gm25287-201ENSMUST00000103846 110 ntBASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Gm22918-201ENSMUST00000103855 110 ntBASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Gm27430-201ENSMUST00000184585 107 ntBASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Gm44333-201ENSMUST00000197168 107 ntBASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
B020004C17RikJ3QP07 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Gm10253-201ENSMUST00000194270 940 ntBASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
B020004C17RikJ3QP07 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms