Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Gm11336-201ENSMUST00000118168 334 ntBASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.43□□□□□ -0.1
Shisa8J3QNX5 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.42□□□□□ -0.1
Shisa8J3QNX5 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.42□□□□□ -0.1
Shisa8J3QNX5 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.42□□□□□ -0.1
Shisa8J3QNX5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa8J3QNX5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa8J3QNX5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms