Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shank1D3YZU1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Shank1D3YZU1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shank1D3YZU1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.1□□□□□ -0.15
Shank1D3YZU1 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.1□□□□□ -0.15
Shank1D3YZU1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Gm8969-201ENSMUST00000199694 526 ntBASIC14.1□□□□□ -0.15
Shank1D3YZU1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.1□□□□□ -0.15
Shank1D3YZU1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shank1D3YZU1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Gm9682-201ENSMUST00000197505 556 ntBASIC14.09□□□□□ -0.15
Shank1D3YZU1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.09□□□□□ -0.15
Shank1D3YZU1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.09□□□□□ -0.15
Shank1D3YZU1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Gm43474-201ENSMUST00000196415 774 ntBASIC14.09□□□□□ -0.15
Shank1D3YZU1 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.09□□□□□ -0.15
Shank1D3YZU1 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.09□□□□□ -0.15
Shank1D3YZU1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Shank1D3YZU1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Shank1D3YZU1 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.08□□□□□ -0.15
Shank1D3YZU1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Shank1D3YZU1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Shank1D3YZU1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Shank1D3YZU1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.08□□□□□ -0.15
Shank1D3YZU1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.08□□□□□ -0.15
Shank1D3YZU1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shank1D3YZU1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shank1D3YZU1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.08□□□□□ -0.16
Shank1D3YZU1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shank1D3YZU1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.08□□□□□ -0.16
Shank1D3YZU1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shank1D3YZU1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shank1D3YZU1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shank1D3YZU1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shank1D3YZU1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shank1D3YZU1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shank1D3YZU1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shank1D3YZU1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shank1D3YZU1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shank1D3YZU1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.08□□□□□ -0.16
Shank1D3YZU1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Shank1D3YZU1 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.08□□□□□ -0.16
Shank1D3YZU1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shank1D3YZU1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.07□□□□□ -0.16
Shank1D3YZU1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Shank1D3YZU1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.07□□□□□ -0.16
Shank1D3YZU1 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.07□□□□□ -0.16
Shank1D3YZU1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.07□□□□□ -0.16
Shank1D3YZU1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms