Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn2B2RVW2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn2B2RVW2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn2B2RVW2 Mir1895-201ENSMUST00000122615 79 ntBASIC18.23■□□□□ 0.51
Clrn2B2RVW2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.23■□□□□ 0.51
Clrn2B2RVW2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn2B2RVW2 Mir6956-201ENSMUST00000183598 62 ntBASIC18.23■□□□□ 0.51
Clrn2B2RVW2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.23■□□□□ 0.51
Clrn2B2RVW2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.23■□□□□ 0.51
Clrn2B2RVW2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
Clrn2B2RVW2 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.23■□□□□ 0.51
Clrn2B2RVW2 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.23■□□□□ 0.51
Clrn2B2RVW2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn2B2RVW2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Clrn2B2RVW2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Clrn2B2RVW2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn2B2RVW2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn2B2RVW2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn2B2RVW2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn2B2RVW2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn2B2RVW2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Gm14057-201ENSMUST00000120631 482 ntBASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Clrn2B2RVW2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Clrn2B2RVW2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn2B2RVW2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn2B2RVW2 Gm15427-201ENSMUST00000117288 531 ntBASIC18.21■□□□□ 0.51
Clrn2B2RVW2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.21■□□□□ 0.51
Clrn2B2RVW2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn2B2RVW2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Clrn2B2RVW2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.21■□□□□ 0.51
Clrn2B2RVW2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.21■□□□□ 0.51
Clrn2B2RVW2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn2B2RVW2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn2B2RVW2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Clrn2B2RVW2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn2B2RVW2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn2B2RVW2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn2B2RVW2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Clrn2B2RVW2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn2B2RVW2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn2B2RVW2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Clrn2B2RVW2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Gm13616-201ENSMUST00000120600 222 ntBASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Gm13365-201ENSMUST00000121188 973 ntBASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn2B2RVW2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clrn2B2RVW2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clrn2B2RVW2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clrn2B2RVW2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
Clrn2B2RVW2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clrn2B2RVW2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clrn2B2RVW2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clrn2B2RVW2 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.19■□□□□ 0.5
Clrn2B2RVW2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.19■□□□□ 0.5
Clrn2B2RVW2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clrn2B2RVW2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.19■□□□□ 0.5
Clrn2B2RVW2 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.19■□□□□ 0.5
Clrn2B2RVW2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clrn2B2RVW2 Gm44335-201ENSMUST00000196879 141 ntBASIC18.19■□□□□ 0.5
Clrn2B2RVW2 Gm44297-201ENSMUST00000198304 141 ntBASIC18.19■□□□□ 0.5
Clrn2B2RVW2 Gm44346-201ENSMUST00000198851 141 ntBASIC18.19■□□□□ 0.5
Clrn2B2RVW2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.19■□□□□ 0.5
Clrn2B2RVW2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms