Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Shroom2A2ALU4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Shroom2A2ALU4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Shroom2A2ALU4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Shroom2A2ALU4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Shroom2A2ALU4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Shroom2A2ALU4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC24.65■■□□□ 1.54
Shroom2A2ALU4 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Shroom2A2ALU4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Shroom2A2ALU4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC24.65■■□□□ 1.54
Shroom2A2ALU4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Shroom2A2ALU4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Shroom2A2ALU4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Shroom2A2ALU4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Shroom2A2ALU4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Shroom2A2ALU4 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Shroom2A2ALU4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Shroom2A2ALU4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Shroom2A2ALU4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Shroom2A2ALU4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Shroom2A2ALU4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
Shroom2A2ALU4 Gm4984-201ENSMUST00000115987 360 ntBASIC24.64■■□□□ 1.53
Shroom2A2ALU4 Gm4875-201ENSMUST00000118257 786 ntBASIC24.64■■□□□ 1.53
Shroom2A2ALU4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Shroom2A2ALU4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC24.64■■□□□ 1.53
Shroom2A2ALU4 Gm42693-201ENSMUST00000196779 631 ntBASIC24.64■■□□□ 1.53
Shroom2A2ALU4 CT030657.3-201ENSMUST00000222707 1200 ntBASIC24.64■■□□□ 1.53
Shroom2A2ALU4 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Shroom2A2ALU4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC24.63■■□□□ 1.53
Shroom2A2ALU4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Shroom2A2ALU4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Shroom2A2ALU4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Shroom2A2ALU4 Gm5898-201ENSMUST00000121016 2071 ntBASIC24.63■■□□□ 1.53
Shroom2A2ALU4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Shroom2A2ALU4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Shroom2A2ALU4 Gm4204-201ENSMUST00000110798 1231 ntBASIC24.63■■□□□ 1.53
Shroom2A2ALU4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Shroom2A2ALU4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC24.63■■□□□ 1.53
Shroom2A2ALU4 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Shroom2A2ALU4 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC24.63■■□□□ 1.53
Shroom2A2ALU4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC24.62■■□□□ 1.53
Shroom2A2ALU4 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom2A2ALU4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Shroom2A2ALU4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Shroom2A2ALU4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Shroom2A2ALU4 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC24.61■■□□□ 1.53
Shroom2A2ALU4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC24.61■■□□□ 1.53
Shroom2A2ALU4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Shroom2A2ALU4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Shroom2A2ALU4 Gm20445-201ENSMUST00000061905 565 ntBASIC24.61■■□□□ 1.53
Shroom2A2ALU4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Shroom2A2ALU4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Shroom2A2ALU4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Shroom2A2ALU4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Shroom2A2ALU4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Shroom2A2ALU4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC24.61■■□□□ 1.53
Shroom2A2ALU4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Shroom2A2ALU4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Shroom2A2ALU4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Shroom2A2ALU4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Shroom2A2ALU4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Shroom2A2ALU4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Shroom2A2ALU4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC24.6■■□□□ 1.53
Shroom2A2ALU4 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Shroom2A2ALU4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC24.6■■□□□ 1.53
Shroom2A2ALU4 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC24.6■■□□□ 1.53
Shroom2A2ALU4 CT009713.10-202ENSMUST00000225734 696 ntBASIC24.6■■□□□ 1.53
Shroom2A2ALU4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Shroom2A2ALU4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Shroom2A2ALU4 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Shroom2A2ALU4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Shroom2A2ALU4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Shroom2A2ALU4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Shroom2A2ALU4 Gm12329-201ENSMUST00000120829 1007 ntBASIC24.59■■□□□ 1.53
Shroom2A2ALU4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Shroom2A2ALU4 Gm43703-201ENSMUST00000200523 763 ntBASIC24.59■■□□□ 1.53
Shroom2A2ALU4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Shroom2A2ALU4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Shroom2A2ALU4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC24.59■■□□□ 1.53
Shroom2A2ALU4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Shroom2A2ALU4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Shroom2A2ALU4 Gm8062-201ENSMUST00000139696 444 ntBASIC24.58■■□□□ 1.53
Shroom2A2ALU4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Shroom2A2ALU4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms