Protein–RNA interactions for Protein: A2A8L1

Chd5, Chromodomain-helicase-DNA-binding protein 5, mousemouse

Predictions only

Length 1,946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd5A2A8L1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Chd5A2A8L1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd5A2A8L1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd5A2A8L1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd5A2A8L1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd5A2A8L1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd5A2A8L1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chd5A2A8L1 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.18■□□□□ 0.5
Chd5A2A8L1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd5A2A8L1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd5A2A8L1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chd5A2A8L1 Gm15920-201ENSMUST00000118998 402 ntBASIC18.17■□□□□ 0.5
Chd5A2A8L1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.17■□□□□ 0.5
Chd5A2A8L1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.17■□□□□ 0.5
Chd5A2A8L1 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd5A2A8L1 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.17■□□□□ 0.5
Chd5A2A8L1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chd5A2A8L1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd5A2A8L1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd5A2A8L1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd5A2A8L1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd5A2A8L1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Chd5A2A8L1 Gm25948-201ENSMUST00000175334 112 ntBASIC18.16■□□□□ 0.5
Chd5A2A8L1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.16■□□□□ 0.5
Chd5A2A8L1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd5A2A8L1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd5A2A8L1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Chd5A2A8L1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Chd5A2A8L1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd5A2A8L1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd5A2A8L1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Chd5A2A8L1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.16■□□□□ 0.5
Chd5A2A8L1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd5A2A8L1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.16■□□□□ 0.5
Chd5A2A8L1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd5A2A8L1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd5A2A8L1 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.15■□□□□ 0.5
Chd5A2A8L1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd5A2A8L1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.15■□□□□ 0.5
Chd5A2A8L1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Chd5A2A8L1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.15■□□□□ 0.5
Chd5A2A8L1 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.15■□□□□ 0.5
Chd5A2A8L1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd5A2A8L1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.15■□□□□ 0.5
Chd5A2A8L1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.15■□□□□ 0.5
Chd5A2A8L1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chd5A2A8L1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Chd5A2A8L1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chd5A2A8L1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Chd5A2A8L1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd5A2A8L1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.14■□□□□ 0.49
Chd5A2A8L1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.14■□□□□ 0.49
Chd5A2A8L1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Chd5A2A8L1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.14■□□□□ 0.49
Chd5A2A8L1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.14■□□□□ 0.49
Chd5A2A8L1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd5A2A8L1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd5A2A8L1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd5A2A8L1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd5A2A8L1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chd5A2A8L1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.14■□□□□ 0.49
Chd5A2A8L1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd5A2A8L1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd5A2A8L1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd5A2A8L1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd5A2A8L1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms