Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc112A0AUP1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc112A0AUP1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.05■□□□□ 0.48
Ccdc112A0AUP1 Mir6982-201ENSMUST00000184354 68 ntBASIC18.05■□□□□ 0.48
Ccdc112A0AUP1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ccdc112A0AUP1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ccdc112A0AUP1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc112A0AUP1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Ccdc112A0AUP1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.05■□□□□ 0.48
Ccdc112A0AUP1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc112A0AUP1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Gm6257-201ENSMUST00000163864 910 ntBASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc112A0AUP1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Gm9013-201ENSMUST00000132939 882 ntBASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.03■□□□□ 0.48
Ccdc112A0AUP1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc112A0AUP1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc112A0AUP1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Ccdc112A0AUP1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc112A0AUP1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc112A0AUP1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc112A0AUP1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ccdc112A0AUP1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.02■□□□□ 0.48
Ccdc112A0AUP1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.02■□□□□ 0.48
Ccdc112A0AUP1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Ccdc112A0AUP1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc112A0AUP1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc112A0AUP1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc112A0AUP1 Gm9987-201ENSMUST00000069768 567 ntBASIC18.02■□□□□ 0.48
Ccdc112A0AUP1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ccdc112A0AUP1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc112A0AUP1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc112A0AUP1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc112A0AUP1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc112A0AUP1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc112A0AUP1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc112A0AUP1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc112A0AUP1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc112A0AUP1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc112A0AUP1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc112A0AUP1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc112A0AUP1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
Ccdc112A0AUP1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.02■□□□□ 0.47
Ccdc112A0AUP1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc112A0AUP1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc112A0AUP1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc112A0AUP1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc112A0AUP1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Gm10013-201ENSMUST00000106074 672 ntBASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms