Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcna-ps2A0A140T8V5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcna-ps2A0A140T8V5 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Gm45328-201ENSMUST00000210942 917 ntBASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.9■□□□□ 0.14
Pcna-ps2A0A140T8V5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcna-ps2A0A140T8V5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Gm33142-201ENSMUST00000193913 867 ntBASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcna-ps2A0A140T8V5 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms