Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhgb8A0A140LI48 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdhgb8A0A140LI48 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhgb8A0A140LI48 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhgb8A0A140LI48 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhgb8A0A140LI48 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhgb8A0A140LI48 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhgb8A0A140LI48 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhgb8A0A140LI48 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhgb8A0A140LI48 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhgb8A0A140LI48 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdhgb8A0A140LI48 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhgb8A0A140LI48 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdhgb8A0A140LI48 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhgb8A0A140LI48 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhgb8A0A140LI48 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhgb8A0A140LI48 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhgb8A0A140LI48 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhgb8A0A140LI48 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Gm29518-201ENSMUST00000190858 372 ntBASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhgb8A0A140LI48 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhgb8A0A140LI48 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhgb8A0A140LI48 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms