Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav19A0A0B4J1K4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav19A0A0B4J1K4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Gm16061-201ENSMUST00000122167 857 ntBASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Gm7370-201ENSMUST00000219471 767 ntBASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav19A0A0B4J1K4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms