Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm44430-201ENSMUST00000203376 995 ntBASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm10052-201ENSMUST00000168019 960 ntBASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Mir6404-201ENSMUST00000183699 94 ntBASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm7729-201ENSMUST00000050143 801 ntBASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav6-1A0A075B5Z8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Sybu-209ENSMUST00000228639 4113 ntBASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6-1A0A075B5Z8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm30025-201ENSMUST00000218555 728 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms