Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm15358-201ENSMUST00000119249 520 ntBASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm11764-201ENSMUST00000120221 623 ntBASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-1A0A075B5Z7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5-1A0A075B5Z7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5-1A0A075B5Z7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5-1A0A075B5Z7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5-1A0A075B5Z7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.52□□□□□ -0.24
Trav5-1A0A075B5Z7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5-1A0A075B5Z7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5-1A0A075B5Z7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5-1A0A075B5Z7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5-1A0A075B5Z7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Trav5-1A0A075B5Z7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm27646-201ENSMUST00000183989 110 ntBASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm43514-201ENSMUST00000198852 424 ntBASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-1A0A075B5Z7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm12350-201ENSMUST00000121208 462 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms