Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Gm7284-201ENSMUST00000131667 944 ntBASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
H2afb2S4R1M3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Gm44454-201ENSMUST00000198541 138 ntBASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb2S4R1M3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Gm25406-201ENSMUST00000157599 105 ntBASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb2S4R1M3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
H2afb2S4R1M3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms