Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Gm15372-201ENSMUST00000120729 834 ntBASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mrpl40Q9Z2Q5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Gm27867-201ENSMUST00000184778 125 ntBASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mrpl40Q9Z2Q5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Gm13312-201ENSMUST00000119631 718 ntBASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Gm6443-201ENSMUST00000203599 874 ntBASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mrpl40Q9Z2Q5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mrpl40Q9Z2Q5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mrpl40Q9Z2Q5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms